Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNAPKLVIGANGFLGSHVTRQLVADCAPQKGEVRAMVRPA-------ANTRSIDDLPLTRF-HGDVFDTATVAEAMAGCDDVYYCVVDTRA--WLRDPSPLFRTNVAGLRNVLDVATDASLRRFVFTSSYATVGRRRGHVATEEDRVDTRKVTPYVRSRVAAEDLVLQYAHDAGLPAVAMCVSTTYGGGDWGRTPHGAFIAGAV-FGRLPFTMRGIRL-EAVGVDDAARALILAAERGRNGERYLISERM-MPLQEVVRIAADEAGVPPPRWSISVPVLYALGALGSLRARLTGKDTELSLASVRMMRSEADVDHGKAVRELGWQPRPVEESIREAARFWAAMRTVGKDPAAS |
1R66 Chain:A ((4-297)) | -----LVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTDEVYGSIDSGSWTESSPLEPN--SPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGAD---WSSVRKV-----------ADRKGHDLRYSL------------DGGKIERELGYRPQ-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R66.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155106 for 2377 contacts (-65.3/contact) +
2D Compatibility (PS) -30283 + (NN) -13106 + (LL) 4436
1D Compatibility (HY) -8000 + (ID) 4350
Total energy: -206409.0 ( -86.84 by residue)
QMean score : 0.495
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