Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTELDDVSSLPSSRRTAGDTWAITESVGATALGVAAARAVETAATNPLIRDEFAKVLVSS--AGTAWARLADADLAWLDGDQLGRRVHRVACDYQAVRTHFFDEYFGAAVDAGVRQVVILAAGLDARAYRLNWPAGTVVYEIDQPSVLEYKAGILQSHGAVPTARRHAVAVDLRDDWPAALIAAGFDGTQPTAWLAEGLLPYLPGDAADRLFDMVTALSAPGSQVAVEAFTMN----TKGNTQRWNRMRERLGLDIDVQALTYHEPDRSDAAQWLATHGWQVHSVSNREEMARLGRAIPQDLVDETVRTTLLRGRLVTPAQPA |
| 2UYQ Chain:A ((14-287)) | --------------------------VGTTAVMVAAARAAETDRPDALIRDPYAKLLVTNTGAGALWEAM--------DAEAAAMVEHMRS--YQAVRTNFFDTYFNNAVIDGIRQFVILASGLDSRAYRLDWPTGTTVYEIDQPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPSARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPLHGDEWREQMQLRFRRVSDAL---------IYHDENRAVVADWLNRHGWRATAQSAPDEMRRVGR--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2UYQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133360 for 1876 contacts (-71.1/contact) +
2D Compatibility (PS) -26560 + (NN) -11817 + (LL) 4816
1D Compatibility (HY) -20000 + (ID) 6500
Total energy: -193421.0 ( -103.10 by residue)
QMean score : 0.510
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