Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNLALWSRPVWDVEPWDRWLRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLELPGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPAHVTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIAITK
3GUF Chain:A ((40-133))
--------------------------------------AQWVPRVDIKEEVNHFVLYADLPGIDPSQ-IEVQMDKGI----LSIRGERKSESSTET-ERFSRIER--RYGSFHRRFALPDSADADGITAAGRNGVLEIRI-------------------
General information:
TITO was launched using:
RESULT:
Template:
3GUF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55131 for 607 contacts (-90.8/contact) +
2D Compatibility (PS) -9892 + (NN) -4921 + (LL) 4320
1D Compatibility (HY) -5200 + (ID) 1700
Total energy: -72524.0 ( -119.48 by residue)
QMean score : 0.596
(partial model without unconserved sides chains):
PDB file :
Tito_3GUF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GUF-query.scw
PDB file :
Tito_Scwrl_3GUF.pdb
: