Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MANSLLDFVISLVRDPEAAARYAANPER--SIAEAHLTDVTRADVNSLIPVVSDSLSMSEPIGAAGGAHAGDRGNVWASGAATAALDAFAPHADAGVVQQHGAVGSVLNQPTPPGPGVTPTDPRPFRAGPHETSALLTSAEIPDTTSEDGGLPTDHPAVWNHPVVDPHTVEPDHHGYDIHG |
3RGA Chain:A ((124-175)) | ------------VTDSSWTARPAPDEERRKELAREHCLRINDGDVDGLLKLYSPRIRFEDPVGS--------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RGA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1861 for 202 contacts (-9.2/contact) +
2D Compatibility (PS) -5009 + (NN) -745 + (LL) 3736
1D Compatibility (HY) -4400 + (ID) 750
Total energy: -9029.0 ( -44.70 by residue)
QMean score : 0.143
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