Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSAMARAIRSGDDAEVADGLTRREHDILAFERQWWKFAGVKEEAIKELFSMSATRYYQVLNALVDRPEALAADPMLVKRLRRLRASRQKARAARRLGFEVT
2P5V Chain:A ((5-53))
-----------------QLTLDKTDIKILQVLQEN---GRLTNVELSERVALSPSPCLRRLKQLEDAGI---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2P5V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9857 for 283 contacts (-34.8/contact) +
2D Compatibility (PS) -5414 + (NN) -2090 + (LL) 4988
1D Compatibility (HY) -3200 + (ID) 400
Total energy: -15973.0 ( -56.44 by residue)
QMean score : 0.442
(partial model without unconserved sides chains):
PDB file :
Tito_2P5V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2P5V-query.scw
PDB file :
Tito_Scwrl_2P5V.pdb
: