Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMTLKVAIGPQNAFVLRQGIRREYVLVIVALCGIADGALIAAGVGGFAALIHAHPNMTLVARFGGAAFLIGYALLAARNAWRPSGLVPSESGPAALIGVVQMCLVVTFLNPHVYLDTVVLIGALANEESDLRWFFGAGAWAASVVWFAVLGFSAGRLQPFFATPAAWRILDALVAVTMIGVAVVVLVTSPSVPTANVALII |
| 2H3O Chain:A ((41-70)) | ------------------------------------------------------GYLDYVLLPALAIFIGLTIYAIQRKRQADA--------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2H3O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7548 for 128 contacts (-59.0/contact) +
2D Compatibility (PS) -3333 + (NN) -2737 + (LL) 15296
1D Compatibility (HY) -400 + (ID) 150
Total energy: 1128.0 ( 8.81 by residue)
QMean score : -0.354
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