Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKRPLRWLTEQITLAGMRPPISPQLLINRPAMQPVDLTGKRILLTGASSGIGAAATKQFGLHRAVVVAVARRKDLLDAVADRITGDGGT-AMSLPCDLSDMEAIDALVEDVEKRIGGIDILINNAGRSIRRPLAESL-ERWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFS--VYNASKAALSAVSRIIETEWGSQGVHSTTLYYPLVATPMIAPTKAYDGLPALTAAEAAEWMVTAARTRPVRIAPRVAVAVNALDSIGPRWVNALMQRRNEQLNP |
| 3AI1 Chain:A ((5-193)) | -------------------------------------ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKW---QFYWELHVMAAVRLARGLVPGMRARGGGAIIHNAS---ICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTP------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AI1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -113832 for 1533 contacts (-74.3/contact) +
2D Compatibility (PS) -20164 + (NN) -8830 + (LL) 8424
1D Compatibility (HY) -12400 + (ID) 3450
Total energy: -150252.0 ( -98.01 by residue)
QMean score : 0.488
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