Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDLVRVERKGRVTTVILNRPASRNAVNGPTAAALCAAFEQFDRDDAASVAVLWGAGGTFCAGADLKAFGTPEANSVHRTGPGPMGPSRMMLSKPVIAAVSGYAVAGGLELALWCDLRVAEEDAVFGVFCRRWGVPLIDGGTVRLPRLIGHSRAMDMILTGRGVPADEALAMGLANRVVPKGQARQAAEELAAQLAALPQQCLRSDRLSALHQWGLPESAALDLEFASIARVAGEALEGARRFAAGAGRHGAPAPRAEQGDTL
3R9Q Chain:A ((10-242))
-QPAVRVEKAGPVTTVILNRPHARNAVDGPTAAALLAAFTEFDADPEASVAVLWGDNGTFCAGADLKAMGTDRGNELHPHGPGPMGPSRLRLSKPVIAAISGHAVAGGIELALWCDLRVVEEDAVLGVFCRRWGVPLIDGGTIRLPRLIGHSRAMDLILTGRPVHANEALDIGLVNRVVARGQAREAAETLAAEIAAFPQQCVRADRDSAIAQWGMAEEAALDNEFGSIERVAT-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
3R9Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -142641 for 1983 contacts (-71.9/contact) +
2D Compatibility (PS) -25880 + (NN) -13260 + (LL) 1556
1D Compatibility (HY) -25600 + (ID) 8700
Total energy: -214525.0 ( -108.18 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_3R9Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R9Q-query.scw
PDB file :
Tito_Scwrl_3R9Q.pdb
: