Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTMPLRGLGPPDDTGVREVSTGDDHHYAMWDAAYVLGALSAADRREFEAHLAGCPECRGAVTELCGVPALLSQLDRDEVAAISESAPTVVAS--GLSP-ELLPSLLAAVHRRRRRTRLITWVASSAAAAVLAIGVLVGVQGHSAAPQRAAVSALPMAQVGTQLLASTVSISGEPWGTFINLRCVCLAPPYASHDTLAMVVVGRDGSQTRLATWLAEPGHTATPAGSISTPVDQIAAVQVVAADTGQVLLQRSL |
2CH2 Chain:A ((170-238)) | -------------------------------------------------HQHDCLLIVDAVASLCGVPFY---MDKWEIDAVYTGAQ-VLGAPPGITPISISPKALDVIRNRRTKSKVFYW------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CH2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14624 for 334 contacts (-43.8/contact) +
2D Compatibility (PS) -6276 + (NN) 2391 + (LL) 12668
1D Compatibility (HY) -6400 + (ID) 1050
Total energy: -13291.0 ( -39.79 by residue)
QMean score : 0.260
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