Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTAAGLSGIDLTDLDNFADGFPHHLFAIHRREAPVYWHRP---TEHTPDGEGFWSVATYAETLEVLRDPVTYSSVTGGQ-RRFGGTVL-QDLPVAGQVLNMMDDPRHTRIRRLVSSGLTPRMIRRVEDDLRRRARGLLDGVEPGAPFDFVVEIAAELPMQMICILLGVPETDRHWLFEAVEPGFDFRGSRRATMPRLNVEDAGSRLYTYALELIAGKRAEPADDMLSVVANATIDDPDAPALSDAELYLFFHLLFSAGAETTRNSIAGGLLALAENPDQLQTLRSDFELLP-TAIEEIVRWTSPSPSKRRTASRAVSLGGQPIEAGQKVVVWEGSANRDPSVFDRADEFDITRKPNPHLGF-GQGVHYCLGANLARLELRVLFEELLSRFGSVRVVEPAEWTRSNRHTGIRHLVVELRGG |
| 3IW0 Chain:A ((25-426)) | --------GFDFTDPAIYAERLPVAEFAELRSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRHSDVFSSYENGVIPRFKNDIAREDIEVQRFVMLNMDAPHHTRLRKIISRGFTPRAVGRLHDELQERAQKIAAEAAAAGSGDFVEQVSCELPLQAIAGLLGVPQEDRGKLFHWSN---EMTGNEDPEYAHIDPKASSAELIGYAMKMAEEKAKNPADDIVTQLIQADI---DGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYK---KVRPETAADEIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFNILRNPNPHVGFGGTGAHYCIGANLARMTINLIFNAVADHMPDLKPISAPERLRSGWLNGIKHWQVDYT-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IW0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -182644 for 3357 contacts (-54.4/contact) +
2D Compatibility (PS) -42932 + (NN) -26149 + (LL) -212
1D Compatibility (HY) -28000 + (ID) 7350
Total energy: -287287.0 ( -85.58 by residue)
QMean score : 0.455
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