Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSSGAGSDATGAGGVHAAGSGDRAVAAAVERAKATAARNIPAFDDLPVPADTANLREGADLNNALLALLPLVGVWRGEGEGRGPD-GDYRFGQQIVVSHDGGDYLNWESRSWRLTATGDYQEPGLREAGFWRFVADPYDPSESQAIELLLAHSAGYVELFYGRPRT-QSSWELVTDALARSRSGVLVGGAKRLYGIVEGGDLAYVEERVDADGGLVPHLSARLSRFVG |
2Q4N Chain:A ((26-166)) | ----------------------------------------------------------------------LLGTWRGQGEGEYPTIPSFRYGEEIRFSHSGKPVIAYTQKTWKLESGA----PMHAESGYFR-------PRPDGSIEVVIAQSTGLVEVQKGTYNVDEQSIKLKSDLVGNASK---VKEISREFELVD-GKLSYVVRMSTTTNPLQPHLKAILDKL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Q4N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5375 for 912 contacts (-5.9/contact) +
2D Compatibility (PS) -13712 + (NN) 118 + (LL) 4092
1D Compatibility (HY) 1200 + (ID) 1150
Total energy: -14827.0 ( -16.26 by residue)
QMean score : 0.140
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