Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRRRAIQPSPALRIGPIELASPVVLAPMAGVTNVAFRALCRQLEQSKVGTVSGLYVCEMVTARALIERHPVTMHMTTFSADESPRSLQLYTVDPD-TTYAAARMIAGEGLADHIDMNFGCPVPKVTKRGGGAALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAEGAAAVALHARTAAQRYSGT-ADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDGVVIGRGCLGRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIRKHIAWYLHGFPAGSALRRALAMVKTFDELDCLLDRLDGTVPFPDSATGARGRQGSPARVALPDGWLTDPDDCRVPEGADAMGSGG |
| 3W9Z Chain:A ((3-242)) | -----------------------VLLAPMEGVLDSLVRELLTEVNDYDLCITEFVRVVDQLLPVKVFHRICPELQNASRTPSGTLVRVQLLGQFPQWLAENAARAV--ELGSWGVDLNCGC-------------LLKDPELIYQ-GAKAMREAVPAHLPVSVKVRLGWDSGEKKFEIADAVQQA-GATELVVHGRTKEQGYRAEHIDWQAIGDIRQRL-NIPVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIP-------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W9Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124070 for 1852 contacts (-67.0/contact) +
2D Compatibility (PS) -23380 + (NN) -9854 + (LL) 7944
1D Compatibility (HY) -15600 + (ID) 3350
Total energy: -168310.0 ( -90.88 by residue)
QMean score : 0.372
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