Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHL--RAEGFDVHSVMCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGA-YGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVAN----SERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILANRLYVLPHAASRASIRRRFERIDRTFDEQAAEGWRH |
| 4YAG Chain:A ((5-264)) | -----GTTAFITGGASGIGFGIAQRLLANGARLVLADIRQDHLDEARQFFEERQQGRNVHTIRLDVSDRAQMAEAARECEAVMGGPDILINNAGIDPSGPFKDATYQDWDYGLAINLMGPINGIMAFTPGMRARGRGGHIVNTASLAGLTPMPSFMAIYATAKAAVITLTETIRDSMAEDNIGVTVLMPGPIKSRIHESGQNRPERFR-AGSGLAETEQQLAKRVVADNWMEPTEVGDMIVDAIVHNKLYVSTHGNWRETCEARFQ---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YAG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159333 for 2186 contacts (-72.9/contact) +
2D Compatibility (PS) -26743 + (NN) -1676 + (LL) 960
1D Compatibility (HY) -15600 + (ID) 4450
Total energy: -206842.0 ( -94.62 by residue)
QMean score : 0.560
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