Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGRCPTVAVVGAGMSGMCVAITLL-SAGITDVCIYEKADDVGGTWRDNTYPGLTCDVPSRLYQYSFAKN----PNWTQMFSRGGEIQDYLRGIAERYGLRHRIRFGATVVSARF--DDGRWVLRTDSGTESTVDFLISATGVLHHPRIPPIAGLDDFRGTVFHSARWDHTVPLLGRRIAVIGTGSTGVQLVCGLAGVAGKVTMFQRTAQWVLPWP----NPRY-----SKLARVFHRAFPCLGSLAYK-----AYSLSFET----FAVALSNPGLHRKLVG----------------AVCRASLRR-VRDPRLRRALTPDYEPMCKRLVMSGGFYRAIQRDDVELVTAG---IDHVEHRGIVTDDGVLHEVDVIVLATGFDS-HAFFRPMQLTGRDGIRIDDVWQDGPHAHQTVAIPGFPNFFMMLGPHSPVGNFPLTAVAESQAEHIVQWIKRWRHGEFDTMEPKSAATEAYNTVLRAAMPNTVWTTGCDSWYLNKDGIPEVWPFAPAKHRAMLANLHPEEYDLRRYAAVRATSRPQSA |
| 3GWD Chain:A ((13-520)) | ---------VIGAGFGGIYAVHKLHHELGLTTVG-FDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINFPNLPGLDTFEGETIHTAAWPEGKSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNRPVNPEQIAEIKADYDRIWERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEAAASFIRAKVAEIIEDPETARKLMPK-GLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTAKGVVTEDGVLHELDVLVFATGFDAVDGNYRRIEIRGRDGLHINDHWDGQPTSYLGVSTANFPNWFMVLGPNGPFTNLPPS--IETQVEWISDTIGYAERNGVRAIEPTPEAEAEWTETCTEIANATLFTKG-DSWIFGAN--------IPGKKPSVLFYLG----GLRNYRAVMA------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -332942 for 3869 contacts (-86.1/contact) +
2D Compatibility (PS) -49309 + (NN) -13420 + (LL) 1896
1D Compatibility (HY) -32800 + (ID) 8500
Total energy: -435075.0 ( -112.45 by residue)
QMean score : 0.441
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