Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLNRFGAAVGVLAAGALVLSACGNDDNVTGGGATTGQASAKVDCGGKKTLKASGSTAQANAMTRFVNVFEQACPGQTLNYTANGSGAGISEFNGNQTDFGGSDVPLSKDEAAAAQRRCGSPAWNLPVVFGPIAVTYNLNSVSS--LNLDGPTLAKIFNGSITQWNNPAIQALNRDFTLPGERIHVVFRSDESGTTDNFQRYLQAASNGAWGK--GAGKSFQGGVGEGARGNDGTSAAAKNTPGSITYNEWSFAQAQHLTMANIVTSAGGDPVAITIDSVGQTIAGATISGV-GNDLVLDTDSFYRPKRPGSYPIVLATYEIVCSKYPDSQVGTAVKAFLQSTIGAGQSGLGDNGYIPIPDEFKSRLSTAVNAIA |
1IXH Chain:A ((3-307)) | -------------------------------------------------SLTGAGATFPAPVYAKWADTYQKET-GNKVNYQGIGSSGGVKQIIANTVDFGASDAPLS-DEKLAQEG-----LFQFPTVIGGVVLAVNIPGLKSGELVLDGKTLGDIYLGKIKKWDDEAIAKLNPGLKLPSQNIAVVRRADGSGTSFVFTSYL-AKVNEEWKNNVGTGSTVKWPIGLGGKGNDGIAAFVQRLPGAIGYVEYAYAKQNNLAYTKLI-SADGKPVSPTEENFANAAKGADWSKTFAQDLT-------NQKGEDAWPITSTTFILIHKDQKKPEQGTEVLKFFDWAYKTGAKQANDLDYASLPDSVVEQVRAA----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1IXH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -100316 for 2719 contacts (-36.9/contact) +
2D Compatibility (PS) -32819 + (NN) -13971 + (LL) 2588
1D Compatibility (HY) -18400 + (ID) 4900
Total energy: -167818.0 ( -61.72 by residue)
QMean score : 0.434
|
|
|