Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCDKLGGVAIAVQGALFEHNERRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQMYDRVVDVPR----------LVSFHDLTIEDPPH-PQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDSVAWHGDTIGRGSTEDTMVAIVSLGATRVFALR---PRGRGPS-----LRLPLAHGDLLVMGGSCQRTFEHAVPKTSAPTGPRVSIQFRPRDVR
3H8X Chain:A ((46-202))
---------------------------------------------------------RVQVFGKWHSVPRKQATYGDAGLTYTFSGLTLSPKPWIPVLERIR----DHVSGVTGQTFNFVLINRYKDGSDHIGEHRDDC-RELAPGSPIASVSFGASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNHPTNTHWYHSLPVRKKVLAPRVNLTFR-----
General information:
TITO was launched using:
RESULT:
Template:
3H8X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57458 for 872 contacts (-65.9/contact) +
2D Compatibility (PS) -15150 + (NN) -11591 + (LL) 4016
1D Compatibility (HY) -8800 + (ID) 2700
Total energy: -91683.0 ( -105.14 by residue)
QMean score : 0.314
(partial model without unconserved sides chains):
PDB file :
Tito_3H8X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H8X-query.scw
PDB file :
Tito_Scwrl_3H8X.pdb
: