Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEPLLVVGLGNPGANYARTRHNLGFVVADLLAARLGAKFKAHKRSGAEVATGRSAGRSLVLAKPRCYMNESGRQIGPLAKFYSVAPANIIVIHDDLDLEFGRIRLKIGGGEGGHNGLRSVVAALGTKDFQRVRIGIGRPPGRKDPAAFVLENFTPAERAEVPTICEQAADATELLIEQGMEPAQNRVHAW
2Z2J Chain:A ((1-180))
MAEPLLVVGLGNPGANYARTRHNLGFVVADLLAARLGAKFKAHKRSGAEVATGRSAGRSLVLAKPRCYMNESGRQIGPLAKFYSVAPANIIVIHDDLDLEFGRIRLKIGGGEGGHNGLRSVVAALGTKDFQRVRIGIGRPPGRKDPAAFVLENFTPAERAEVPTICEQAADATELLIEQG-----------
General information:
TITO was launched using:
RESULT:
Template:
2Z2J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105596 for 1498 contacts (-70.5/contact) +
2D Compatibility (PS) -19065 + (NN) -4100 + (LL) 992
1D Compatibility (HY) -22000 + (ID) 9000
Total energy: -158769.0 ( -105.99 by residue)
QMean score : 0.607
(partial model without unconserved sides chains):
PDB file :
Tito_2Z2J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z2J-query.scw
PDB file :
Tito_Scwrl_2Z2J.pdb
: