Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAEIVLDHVNKSYPDGHTAVRDLNLTIADGEFLILVGPSGCGKTTTLNMIAGLEDISSGELRIAGERVNEKAPKDRDIAMVFQSYALYPHMTVRQNIAFPLTLAKMRKADIAQKVSETAKILDLTNLLDRKPSQLSGGQRQRVAMGRAIVRHPKAFLMDEPLSNLDAKLRVQMRGEIAQLQRRLGTTTVYVTHDQTEAMTLGDRVVVMYGGIAQQIGTPEELYERPANLFVAGFIGSPAMNFFPARL---TAIGLTLPFGE-VTLAPEVQGVIAAHPKP-ENVIVGVRPEHIQDAALIDAYQRIRALTFQVKVNLVESLGADKYLYFTTESPAVHSVQLDELAEVEGESALHENQFVARVPAESKVAIGQSVELAFDTARLAVFDADSGANLTIPHRA |
| 4TQV Chain:C ((2-362)) | VASVSIQNVVKRY-DKTTVVHGVSLDIEPGEFVVLVGPSGCGKSTTLRMVAGLEEISGGTIRIDGRVINDLAPKDRDVAMVFQNYALYPHLNVRDNISFGLRLKRTKKSVIDAAVKTAADILGLQPLLERKPSDLSGGQRQRVAMGRAIVRDPKVFLFDQPLSNLDAKLRTQMRAEIKRLHQRLGTTVIYVTHDQVEAMTLADRIVVMRDGLIEQIGKPMDLFLHPANTFVASFIGSPPMNLMPARIAVDSTQHVELNGGNRISLLPRA----GTHLAPGQEVVFGIRPEDVT----LDGVEGSERAQIKATVDIVEPLGSESILHAT----------------------VGDHSLVVKVGGLNEVHPGDPVTLHVDLTRVHLFDAQSQASI------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TQV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -229043 for 2811 contacts (-81.5/contact) +
2D Compatibility (PS) -38890 + (NN) -12844 + (LL) 2620
1D Compatibility (HY) -38000 + (ID) 9300
Total energy: -325457.0 ( -115.78 by residue)
QMean score : 0.450
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