Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEGFAGKVAVVTGAGSGIGQALAIELARSGA-KVAISDVDTDGLADTEHRLKAISTPVKTDRLDVTEREAFLAYADAVNEHFGTVNQIYNNAGIAFTGDIEVSQFKDIERVMDVDFWGVVNGTKAFLPHLIASGD-GHVINISSVFGLFSAPGQAAYNSAKFAVRGFTEALRQEMALAGHPVKVTTVHPGGVKTAIARNATAAEGLDQAELAETFDKRVAH--LSPQRAAQIILTGVAKNKARVLVGVDAKVLDLVVRLTGSGYQRIFPIITGRLIPRPR |
| 4YAC Chain:A ((1-250)) | MQDLEGKVAFVTGGGSGVALGQAKVLAEEAQMKVVIADIRQDHLDEAMGYFSQKNVAVHPVRLDLTDRAAYAAAVDEAEQVFGPVDLLCNTAGVSQFGPIEKATFDDWDWQMDVNVNGVINGVMTVMPRMIERGQGGHILITASMSAFVALPTTGIYCTTKYAVRGLAESLRVEM--PKYNIGVSLLCPGG----------------EAVFAGL--KRVIEHGFDPVDLGRVVLDAVRNDRFWVL----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YAC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75109 for 1858 contacts (-40.4/contact) +
2D Compatibility (PS) -24443 + (NN) -12364 + (LL) 4060
1D Compatibility (HY) -17600 + (ID) 3950
Total energy: -129406.0 ( -69.65 by residue)
QMean score : 0.466
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