Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSGRAIGTETEWWVPGRVEIDDVAPVVSCGVYPAKAVVGEVVPVSAAVWREGHEAVAATLVVRYLGVRYPHLTDRP--RARVLPTPSEPQQRVKPLLIPMTSGQEPFVFHGQFTPDRVGLWTFRVDGWGDPIHTWRHGLIAKLDAGQGETELSNDLLVGAVLLERAATGVPRGLRDPLLAAAAALRTPGDPVTRTALALTPEIEELLADYPLRDLVTRGEQFGVWVDRPLARFGAWYEMFPRSTGGWDDDGNPVHGTFATAAAELPRIAGMGFDVVYLPPIHPIGKVHRKGRNNSPTAAPTDVGSPWAIGSDEGGHDTVHPSLGTIDDFDDFVSAARDLGMEVALDLALQCAPDHPWAREHRQWFTELPDGTIAYAENPPKKYQDIYPLNFDNDPEGLYDEVLRVVQHWVNHGVKFFRVDNPHTKPPNFWAWLIAQVKTVDPDVLFLSEAFTPPARQYGLAKLGFTQSYSYFTWRTTKWELTEFGNQIAELADYRRPNLFVNTPDILHAVLQHNGPGMFAIRAVLAATMSPAWGMYCGYELFEHRAVREGSEEYLDSEKYELRPRDFASALDQGRSLQPFITRLNIIRRLHPAFQQLRTIHFHHVDNDALLAYSKFDPATGDCVLVVVTLNAFGPEEATLWLDMAALGMEDYDRFWVRDEITGEEYQWGQANYIRIDPARAVAHIINMPAVPYESRNTLLRRR |
5CGM Chain:A ((3-697)) | -------------VAGRIVIDDVQPVVSNGRYPAKAVVGEVVPVAATVWREGHDAVAATLVVRYHGTTYPDLADPPPG----------------PQRLPMSPGHTPDVFHGHFTPDRVGLWTYRVDGWGDPIASWRHNVTAKL---QGESELNNDLLVGARLLERAATGVPRELREALLEAAAALRAPGDPFTRAGAALSAEVSDLLAEYPLREFVTRGEQYGVWVDRPEARFSSWYEMFPRSTGGWDAEGRPVHGTFATAAEALPRIARMGFDVVYLPPIHPIGKVHRKGRNNSVTAAPGDVGSPWAIGSDEGGHDAVHPQLGTIEDFDEFVASARDLGLEVALDLALQCAPDHPWAREHPEWFTVLPDGSIAYAE----KYQDIYPLNFDNDPAGIYQEVLRVVRFWISHGVNIFRVDNPHTKPPNFWAWLIGQIKNENPDVLFLSEAFTRPARLYGLAKLGFTQSYTYFTWRTSKWELTEFGQEIAAKADIARPNLFVNTPDILHESLQHGGPGMFAIRAVLAATMGPAWGVYSGYELFENQPVRPGSEEYLNSEKYELRPRDFESALARGESLEPFLTRLNEIRRLHPALRELRTIRFHHVDNDALLAYSKFDPGTGDTVLVVVTLNPFGAEEATLWLDMPELGMEPYDRFWVRDEITGEEYQWGQANYVRLDPAKAVAHVLNMPLIPADKRLQLLRR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5CGM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -365182 for 5624 contacts (-64.9/contact) +
2D Compatibility (PS) -70970 + (NN) -30399 + (LL) 1624
1D Compatibility (HY) -77600 + (ID) 26300
Total energy: -568827.0 ( -101.14 by residue)
QMean score : 0.542
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