Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVGEGPDTKPTARGQPAAVGRVVVLSGPSAVGKSTVVRCLRERIPNLHFSVSATTRAPRPGEVDGVDYHFIDPTRFQQLIDQGELLEWAEIHGGLHRSGTLAQPVRAAAATGVPVLIEVDLAGARAIKKTMPEAVTVFLAPPSWQDLQARLIGRGTETADVIQRRLDTARIELAAQGDFDKVVVNRRLESACAELVSLLVGTAPGSP
1ZNX Chain:A ((19-200))
-------------------VGRVVVLSGPSAVGKSTVVRCLRERIPNLHFSVSATTRAPRPGEVDGVDYHFIDPTRFQQLIDQGELLEWAEIHGGLHRSGTLAQPVRAAAATGVPVLIEVDLAGARAIKKTMPEAVTVFLAPPSWQDLQARLIGRGTETADVIQRRLDTARIELAAQGDFDKVVVNRRLESACAELVSLLV-------
General information:
TITO was launched using:
RESULT:
Template:
1ZNX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106322 for 1314 contacts (-80.9/contact) +
2D Compatibility (PS) -20302 + (NN) -10799 + (LL) -172
1D Compatibility (HY) -24400 + (ID) 9100
Total energy: -171095.0 ( -130.21 by residue)
QMean score : 0.646
(partial model without unconserved sides chains):
PDB file :
Tito_1ZNX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZNX-query.scw
PDB file :
Tito_Scwrl_1ZNX.pdb
: