Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMPDYHALIVGAGFSGIGAAIKLDRAGFSDYLVVEAGDGVGGTWHWNTYPGIAVDIPSFSYQF----SFEQSRHWSRTYAPGHELKAYAEHCVDKYGIRSRIRLNTKVLAAEFDDEHSLWRVQTDPGGEITARFLISACGILTVPKLPDIDGVDSFEGVTMHTARWDHTQ-------DLTGKRVGIIGTGASAVQVIPEMAPIVSHLTVFQRTPIWCFPKFDVPL------------PTAVRWAM---------RIP-GGKAVHRLLSQAFVEATF--PIAAHYFAVF-PLAKHMESAG------RRYLRQQVHDPVVREQLTPR-YAVGCKRPGFHNTYLSTFNRDNVRLV---TEPIDKITPTAVATTDGASHEIDVLVLATGFKVLDTDSIPTYAVTGTGGASLSRFWDEHRLQAYEGVSVPGYPNFFTVFGPYGYVGSSYFALIET---QAHHIIRCLKRARRTGATRIEVTEEANARYFAEVMRRRHRQVFWQDSCRLANSYYFDKNGDVPLRPTTTVEAYWRSRRFDLGDYRISS |
| 3UOY Chain:A ((8-486)) | --PALDAVVIGAGVTGIYQAFLINQAGMK-VLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASRMPDIKGIDSFKGESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNWCTPLGNSPMSKEKMDSLRNRYPTILEYVKSTDTAFPYHRDPRKGTDVSESERDAFFEELYRQPGYGIWLSGFRDLLLNKESNKFLADFVAKKIRQRVKDPVVAEKLIPKDHPFGAKRVPMETNYYETYNRDNVHLVDIREAPIQEVTPEGIKTAD-AAYDLDVIIYATGFD----GSLDRIDIRGKDNVRLIDAWAEGP-STYLGLQARGFPNFFTLVGPHN--GSTFCNVGVCGGLQAEWVLRMISYMKDNGFTYSEPTQAAENRWTEEV------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UOY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -301882 for 3444 contacts (-87.7/contact) +
2D Compatibility (PS) -46134 + (NN) -18615 + (LL) 4212
1D Compatibility (HY) -31600 + (ID) 8450
Total energy: -402469.0 ( -116.86 by residue)
QMean score : 0.521
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