Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTEPTVARPDIDPVLKMLLDTFPVTFTAADGVEVARARLRQLKT---PPELLPELRIEERTVGYDGLTDIPVRVYWPPVVRDNLPVVVYYHGGGWSLGGLDTHDPVARAHAVGAQAIVVSVDYRLAPEHPYPAGIDDSWAALRWVGENAAELGGDPSRIAVAGDSAGGNISAVMAQLARDVGGPPLVFQLLWYPTTMADLSLP--SFTENADAPILDRDVIDAFLAWYVPGLDISDHTMLPTTLAPGNADLSGLPPAFIGTAEHDPLRDDGACYAELLTAAGVSVELSNEPTMVHGYVNFALVVPAAAEATGRGLAALKRALHA |
| 2HM7 Chain:A ((3-309)) | ----------LDPVIQQVLDQL-NRMPAPDYKHLSAQQFRSQQSLFPPVKKEPVAEVREFDMDLPGRT-LKVRMYRPEGVEPPYPALVYYHGGSWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHKFPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGYDPAHPPASIEENAEGYLLTGGMMLWFRDQYLNSLEELTHPWFSPVLYP---DLSGLPPAYIATAQYDPLRDVGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDAL-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2HM7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -200928 for 2657 contacts (-75.6/contact) +
2D Compatibility (PS) -32552 + (NN) -14857 + (LL) 360
1D Compatibility (HY) -21600 + (ID) 6700
Total energy: -276277.0 ( -103.98 by residue)
QMean score : 0.560
|
|
|