Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMPTEYPATAEESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVILSNHGPINLATLATLLGVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARIVEQMAPAERHGLVRALTAFTEAGGEPDARYEIE
2A61 Chain:A ((17-121))
--------------------------FMVKVEGRKVLR-DFGITPAQFDILQKIYFEGPKRPGELSVLLGVAKSTVTGLVKRLEADGYLTRTPDPADRRAYFLVITRKGEEVIEKVIERRENFIEKITSDLG----------------------------
General information:
TITO was launched using:
RESULT:
Template:
2A61.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62833 for 701 contacts (-89.6/contact) +
2D Compatibility (PS) -10850 + (NN) -2996 + (LL) 4136
1D Compatibility (HY) -7600 + (ID) 1550
Total energy: -81693.0 ( -116.54 by residue)
QMean score : 0.438
(partial model without unconserved sides chains):
PDB file :
Tito_2A61.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A61-query.scw
PDB file :
Tito_Scwrl_2A61.pdb
: