Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRTPRRHCRRIAVLAAVSIAATVVAGCSSGSKPSGGPLPDAKPLVEEATAQTKALKSAHMVLTVNGKIPGLSLKTLSGDLTTNPTAATGNVKLTLGGSDIDADFVVFDGILYATLTPNQWSDFGPAADIYDPAQVLNPDTGLANVLANFADAKAEGRDTINGQNTIRISGKVSAQAVNQIAPPFNATQPVPATVWIQETGDHQLAQAQLDRGSGNSVQMTLSKWGEKVQVTKPPVS
3MHA Chain:A ((8-202))
-----------------------------------GPLPDAKPLVEEATAQTKALKSAHMVLTVNGKIPGLSLKTLSGDLTTNPTAATGNVKLTLGGSDIDADFVVFDGILYATLTPNQWSDFGPAADIYDPAQVLNPDTGLANVLANFADAKAEGRDTINGQNTIRISGKVSAQAVNQIAPPFNATQPVPATVWIQETGDHQLAQAQLDRGSGNSVQMTLSKWGEKVQV------
General information:
TITO was launched using:
RESULT:
Template:
3MHA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91562 for 1532 contacts (-59.8/contact) +
2D Compatibility (PS) -21369 + (NN) -14006 + (LL) 2312
1D Compatibility (HY) -21600 + (ID) 9750
Total energy: -155975.0 ( -101.81 by residue)
QMean score : 0.506
(partial model without unconserved sides chains):
PDB file :
Tito_3MHA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MHA-query.scw
PDB file :
Tito_Scwrl_3MHA.pdb
: