Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTVVPGAPSRPASAVSRPSYRQCVQASAQTSARRYSFPSYRRPPAEKLVFPVLLGILTLLLSACQTASASGYNEPRGYDRATLKLVFSMDLGMCLNRFTYDSKLAPSRPQVVACDSREARIRNDGFHANAPSCMRIDYELITQNHRAYYCLKYLVRVGYCYPAVTTPGKPPSVLLYAPSACDESLPSPRVATALVPGTRSANREFSRFVVTEIKSLGAGGRCDSASVSLQPPEEIEGPAIPPASSQLVCVAPK |
| 4ZYP Chain:L ((29-60)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------RVGYMHWYQQKPGKAPKLLIYDTSKLASGVPS------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZYP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10919 for 140 contacts (-78.0/contact) +
2D Compatibility (PS) -3573 + (NN) -3901 + (LL) 13372
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -8471.0 ( -60.51 by residue)
QMean score : 0.201
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