Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNHTYRVIEIVGTSPDGVDAAIQGGLARAAQTMRALDWFEVQSIRGHLVDGAVAHFQVTMKVGFRLEDS
2YJ0 Chain:A ((1-68))
-SNHTYRVIEIVGTSPDGVDAAIQGGLARAAQTMRALDWFEVQSIRGHLVDGAVAHFQVCMKVGFRLED-
General information:
TITO was launched using:
RESULT:
Template:
2YJ0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39079 for 415 contacts (-94.2/contact) +
2D Compatibility (PS) -7725 + (NN) -3520 + (LL) 180
1D Compatibility (HY) -9200 + (ID) 3350
Total energy: -62694.0 ( -151.07 by residue)
QMean score : 0.507
(partial model without unconserved sides chains):
PDB file :
Tito_2YJ0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2YJ0-query.scw
PDB file :
Tito_Scwrl_2YJ0.pdb
: