Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGANHVRNDPIMARLTVITTGGTISTTAGPDGVLRPTHCGA-------TLIAGLDMDSDIEVVDLMALDSSKLTPADWDRIGAAVQEAFRGG-ADGVVITHGTDTLEETALWLDLTYAGSRPVVLTGAMLSADAPGADGPANLRDALAVAADPAARDLGVLVSFGGRVLQPLGLHKVANPDLCGFAGESLGFTSGGV-RLTRTKTRPYLGDLGAAVA-------------PRVDIVAVYPGSDAVAMDACVAAGARAVVLEALGSGNAGAAVIEGVRRHCRDGSDPVVIAVSTRVAGARVGAGYGPGHDLVEAGAVMVPRLPPSQARVLLMAALAANSPVADVIDRWG |
2WLT Chain:A ((5-329)) | --------LPTIA---LLATGGTIAGS-G--ASLGSYKSGELGVKELLKAIPSLNKIARIQGEQVSNIGSQDMNEEIWFKLAQRAQELLDDSRIQGVVITHGTDTLEESAYFLNLVLHSTKPVVLVGAMRNASSLSADGALNLYEAVSVAVNEKSANKGVLVVMDDTIFSVREVVKTHTTHVSTFK----ALNSGAIGSVYYGKTRYYMQPLRKHTTESEFSLSQLKTPLPKVDIIYTHAGMTPDLFQASLNSHAKGVVIAGVGNGNVSAGFLKAMQEASQMG---VVIVRSSRVGSGGVTSG---EIDDKAYGFITSDNLNPQKARVLLQLALTKTNDKAKIQEMF- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WLT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -228591 for 2655 contacts (-86.1/contact) +
2D Compatibility (PS) -33473 + (NN) -19754 + (LL) 56
1D Compatibility (HY) -16800 + (ID) 4800
Total energy: -303362.0 ( -114.26 by residue)
QMean score : 0.537
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