Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTTQTAKASRRARIERRTRESDIVIELDLDGTGQVAVDTGVPFYDHMLTALGSHASFDLTVRATGDVEIEAHHTIEDTAIALGTALGQALGDKRGIRRFGDAFIPMDETLAHAAVDLSGRPYCVHTGEPDHLQHTTIAGSSVPYHTVINRHVFESLAANARIALHVRVLYGRDPHHITEAQYKAVARALRQAVEPDPRVSGVPSTKGAL
4LPF Chain:A ((16-205))
---------SRRARIERRTRESDIVIELDLDGTGQVAVDTGVPFYDHMLTALGSHASFDLTVRATGDVEIEAHHTIEDTAIALGTALGQALGDKRGIRRFGDAFIPMDETLAHAAVDLSGRPYCVHTGEPDHLQHTTIAGSSVPYHTVINRHVFESLAANARIALHVRVLYGRDPHHITEAQYKAVARALRQAVEPDPR-----------
General information:
TITO was launched using:
RESULT:
Template:
4LPF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -134465 for 1645 contacts (-81.7/contact) +
2D Compatibility (PS) -20457 + (NN) -9158 + (LL) 1168
1D Compatibility (HY) -22000 + (ID) 9500
Total energy: -194412.0 ( -118.18 by residue)
QMean score : 0.463
(partial model without unconserved sides chains):
PDB file :
Tito_4LPF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4LPF-query.scw
PDB file :
Tito_Scwrl_4LPF.pdb
: