Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDQQSTRTDITVNVDGFWMLQALLDIRHVAPELRCRPYVSTDSNDWLNEHPGMAVMREQGIVVNDAVNEQVAARMKVLAAPDLEVVALLSRGKLLYGVIDDENQPPGSRDIPDNEFRVVLARRGQHWVSAVRVGNDI---------TVDDVTVSDSASIAALVMDGLESIHHADPAAINAVNVPMEEMLEATKSWQESGFNVFSGGDLRRMGISAATVAALGQALSDPAAEVAVYARQYRDDAKGPSASVLSLKDGSGGRIALYQQARTAGSGEAWLAICPATPQLVQVGVKTVLDTLPYGEWKTHSRV |
4W4I Chain:A ((73-293)) | ----------------------------------------------------MGLLSPQGVI-----NPAVADWIKVVCFPDRW--------------LDLRYVGPASADGACELLRGIVALRTGTGK---KTGNGVVALRNAQLVTFTAMDIDDPRALVPILGVGLA---HRPPARFDEFSLPTRVGARADERLRS---GVPLGEVVDYLGIPASARPVVESVFSGPRSYVEIVAGCNRDGRHTTTEVGLSIVDTSAGRV-LVSPSR-AFDGEWVSTFSPGTPFAIAVAIQTLTACLPD--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4W4I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70979 for 1457 contacts (-48.7/contact) +
2D Compatibility (PS) -21445 + (NN) -1974 + (LL) 5920
1D Compatibility (HY) -10800 + (ID) 2850
Total energy: -102128.0 ( -70.09 by residue)
QMean score : 0.400
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