Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQTLTVADFALRLAVGVGCGAIIGLERQWRARMAGLRTNALVATGATLFVLYAVATEDSSPTRVASYVVSGIGFLGGGVILREGFNVRGLNTAATLWCSAAVGVLAASGHLVFTLIGTGTIVAVHLLGRPLGRLVDRDNAVEDEGLQPYQVRVICRPKAETYVRAHIVQRTSSNDITLRGIRTGPAGDDNITLTAHLLMVGHTPAKLERLVAELSLQPGVYAVHWYAGEHAQAE
1MWH Chain:A ((1107-1165))
--------------------------------------------------------------------------------------------------------------------------------------------------------------AQTLFMAKTVSGLDVNAIDSALLRLRTLGADKKALTAQLLMVGLQESEADALAGKIMLQ-----------------
General information:
TITO was launched using:
RESULT:
Template:
1MWH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16972 for 377 contacts (-45.0/contact) +
2D Compatibility (PS) -6032 + (NN) 240 + (LL) 12940
1D Compatibility (HY) -3200 + (ID) 1000
Total energy: -14024.0 ( -37.20 by residue)
QMean score : 0.357
(partial model without unconserved sides chains):
PDB file :
Tito_1MWH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MWH-query.scw
PDB file :
Tito_Scwrl_1MWH.pdb
: