Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTYVIGSECVDVMDKSCVQECPVDCIYEGARMLYINPDECVDCGACKPACRVEAIYWEGDLPDDQHQHLGDNAAFFHQVLPGRVAPLGSPGGAAAVGPIGVDTPLVAAIPVECP
1BD6 Chain:A ((2-77))
--YVITEPCIGTKDASCVEVCPVDCIHEGEDQYYIDPDVCIDCGACEAVCPVSAIYHEDFVPEEWKSYIQKNRDFFKK------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1BD6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52619 for 558 contacts (-94.3/contact) +
2D Compatibility (PS) -7891 + (NN) -4554 + (LL) 1408
1D Compatibility (HY) -8400 + (ID) 1800
Total energy: -73856.0 ( -132.36 by residue)
QMean score : 0.309
(partial model without unconserved sides chains):
PDB file :
Tito_1BD6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BD6-query.scw
PDB file :
Tito_Scwrl_1BD6.pdb
: