Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MADRVLRGSRLGAVSYETDRNHDLAPRQIARYRTDNGEEFEVPFADDAEIPGTWLCRNGMEGTLIEGDLPEPKKVKPPRTHWDMLLERRSIEELEELLKERLELIRSRRRG
2M6P Chain:A ((26-71))
-------------------------PRQIARYRTDNGEEFEVPFADDAEIPGTWLCRNGMEGTLIEGDLPE----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2M6P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8912 for 263 contacts (-33.9/contact) +
2D Compatibility (PS) -5043 + (NN) -2357 + (LL) 4888
1D Compatibility (HY) -5200 + (ID) 2300
Total energy: -18924.0 ( -71.95 by residue)
QMean score : 0.325
(partial model without unconserved sides chains):
PDB file :
Tito_2M6P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2M6P-query.scw
PDB file :
Tito_Scwrl_2M6P.pdb
: