Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQEQTKRGGGGGDDDDIAGSTAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQKGGQ
4BJR Chain:A ((491-517))
-------------------------------------SLLDEIDGLLENNAEEFVRSYVQKGGE
General information:
TITO was launched using:
RESULT:
Template:
4BJR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 577 for 86 contacts (6.7/contact) +
2D Compatibility (PS) -2938 + (NN) -665 + (LL) 1068
1D Compatibility (HY) -3600 + (ID) 1000
Total energy: -6558.0 ( -76.26 by residue)
QMean score : 0.377
(partial model without unconserved sides chains):
PDB file :
Tito_4BJR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BJR-query.scw
PDB file :
Tito_Scwrl_4BJR.pdb
: