Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDPLHVTFVCTGNICRSPMAEKMFAQQLRHRGLGDAVRVTSAGTGNWHVGSCADERAAGVLRAHGYPTDHRAAQVGTEHLAADLLVALDRNHARLLRQLGVEAARVRMLRSFDPRSGTHALDVEDPYYGDHSDFEEVFAVIESALPGLHDWVDERLARNGPS
2LUO Chain:A ((1-163))
MSDPLHVTFVCTGNICRSPMAEKMFAQQLRHRGLGDAVRVTSAGTGNWHVGSCADERAAGVLRAHGYPTDHRAAQVGTEHLAADLLVALDRNHARLLRQLGVEAARVRMLRSFDPRSGTHALDVEDPYYGDHSDFEEVFAVIESALPGLHDWVDERLARNGPS
General information:
TITO was launched using:
RESULT:
Template:
2LUO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114372 for 1427 contacts (-80.1/contact) +
2D Compatibility (PS) -17604 + (NN) -8670 + (LL) 0
1D Compatibility (HY) -19600 + (ID) 8150
Total energy: -168396.0 ( -118.01 by residue)
QMean score : 0.517
(partial model without unconserved sides chains):
PDB file :
Tito_2LUO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LUO-query.scw
PDB file :
Tito_Scwrl_2LUO.pdb
: