Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTATQSPPEPAPDRVRLAGCPLAGTPDVGLTAQDATTALGVPTRRRASSGGIPVATSMWRDAQTVRTYGPAVAKALALRVAGKARSRLTGRHCRKFMQLTDFDPFDPAIAADPYPHYRELLAGERVQYN--PKRDVYILSRYADVREAARN-------HDTLSSARGVTFSRGWLPFLPTSDPPAHTRMRKQLAPGMARGALETWRPMVDQLARELVGGLLTQTPADVVSTVAAPMPMRAITSVLGVDGPDEAAFCRLSNQAVRITDV-ALSASGLISLVQGFAGFRRLRALFTHRR---DNGLLRECTVLGKLATHAEQG-RLSDDELFFFAVLLLVAGYESTAHMISTLFLTLADYPDQLTLLAQQPDLIPSAIEEHLRFISPI-QNICRTTRVDYSVGQAVIPAGSLVLLAWGAANRDPRQYEDPDVFRADRNPVGHLAFGSGIHLCPGTQLARMEGQAILREIVANIDRIEV-----VEPPTWTTNANLRGLTRLRVAVTPRVAP |
3A4H Chain:A ((12-403)) | ------------------------------------------------------------------------------------------------------DLFSGTFWQNPHPAYAALRAEDPVRKLALPDGPVWLLTRYADVREAFVDPRLSKDWRHTLPEDQRADMPATPTPMMILMDPPDHTRLRKLVGRSFTVRRMNELEPRITEIADGLLAGLPTDGPVDLMREYAFQIPVQVICELLGVPAEDRDDFSAWS--SVLVDDSPADDKNAAMGKLHGY-----LSDLLERKRTEPDDALLSSL-----LAVSDEDGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDPSLISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLDITRDASGGVFFGHGIHFCLGAQLARLEGRVAIGRLFA--DRPELALAVGLDELVYRESTLVRGLSRMPVTMGPRSA- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3A4H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -224318 for 2969 contacts (-75.6/contact) +
2D Compatibility (PS) -40852 + (NN) -29276 + (LL) 6464
1D Compatibility (HY) -28800 + (ID) 6950
Total energy: -323732.0 ( -109.04 by residue)
QMean score : 0.483
|
|
|