Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHAKVGDYLVVKGTTTERHDQHAEIIE--VRSADGSPPYVVRWLVNGHETTVYP---------GSDAVVVTATEHAEAEKRAAARAGHAAT
4V36 Chain:A ((55-141))
--AKVGQRLVVLGDPSGREDSFPLVIKEFLHAADQKGYLVIFYQIEREDMALYHDFGYRFFKLGEEAIVDLDTFTISGKKRAGLRA-----
General information:
TITO was launched using:
RESULT:
Template:
4V36.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10680 for 337 contacts (-31.7/contact) +
2D Compatibility (PS) -8088 + (NN) -2819 + (LL) 464
1D Compatibility (HY) -5200 + (ID) 1200
Total energy: -27523.0 ( -81.67 by residue)
QMean score : 0.426
(partial model without unconserved sides chains):
PDB file :
Tito_4V36.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4V36-query.scw
PDB file :
Tito_Scwrl_4V36.pdb
: