Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTNPFDDDNGAFFVLVNDEDQHSLWPVFADIPAGWRVVHGEASRAACLDYVEKNWTDLRPKSLRDAMVED
2MYY Chain:A ((8-75))
MSDNPFDDEDGMFFVLINDEEQHSLWPTFADVPAGWRVVFGEASRASCVEYVDQHWTDIRPKSLREKL---
General information:
TITO was launched using:
RESULT:
Template:
2MYY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24462 for 365 contacts (-67.0/contact) +
2D Compatibility (PS) -7310 + (NN) -5416 + (LL) 220
1D Compatibility (HY) -8400 + (ID) 2450
Total energy: -47818.0 ( -131.01 by residue)
QMean score : 0.399
(partial model without unconserved sides chains):
PDB file :
Tito_2MYY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2MYY-query.scw
PDB file :
Tito_Scwrl_2MYY.pdb
: