Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTVPARPTPLFADIADVSRR---LAETGYLPDTATATAVFLADRLGKPLLVEGPAGVGKTELARAVAQATGSGLVRLQCYEGVDEARALYEWNHAKQILRIQAGSGDWEATKTDVFSEEFLLQRPLLTAIRRTEPTVLLIDETD-----------KADIEIEGLLLEVLSDFAVTVPELGTLTATRAPFVLLTSNATRELSEALKRRC-LYLHIDFPTPELERRILL----SRVPELPEHFA-EELVRIIGVLRGMQLKKVPSIAETIDWGRTVLALGLDTIDDAVVAATLGVVLKHQSDQQRATGELRLN |
| 4CR4 Chain:M ((170-410)) | MEVDEKPTETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARACAAQTNATFLKL----------------AAPQLVQMYIGEGAK-------------LVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEKSGDREVQRTMLELLN-------QLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRAQILQIHSRKMTTDDDINWQELARSTDEFNGAQLKAV-----TVEAGMIALRNGQSSV----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CR4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95469 for 1604 contacts (-59.5/contact) +
2D Compatibility (PS) -23099 + (NN) -6185 + (LL) 5432
1D Compatibility (HY) -7200 + (ID) 3500
Total energy: -130021.0 ( -81.06 by residue)
QMean score : 0.151
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