Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSVVAVTIFVAAYVLIASDRVNKTMVALTGAAAVVVLPVITSHDIFYSHDTGIDWDVIFLLVGMMIIVGVLRQTGVFEYTAIWAAKRARGSPLRIMILLVLVSALASALLDNVTTVLLIAPVTLLVCDRLNINTTSFLMAEVFASNIGGAATLVGDPPNIIVASRAGLTFNDFMLHLTPLVVIVLIALIAVLPRLFGSITVEADRIADVMALDEGEAIRDRGLLVKCGAVLVLVFAAFVAHPVLHIQPSLVALLGAGMLIVVSGLTRSEYLSSVEWDTLLFFAGLFIMVGALVKTGVVNDLARAATQLTGGNIVATAFLILGVSAPISGIIDNIPYVATMTPLVAELVAVMGGQPSTDTPWWALALGADFGGNLTAIGASANVVMLGIARRAGAPISFWEFTRKGAVVTAVSIALAAIYLWLRYFVLLH |
2DPW Chain:A ((69-165)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RGGLLENLEQALEHVEGRVLVATGDIPHLTEEAVRFVLDKAPEAALVYPIVPK-EAVEARFPRTKRTYARLREGTFTGGNLLLLDKSLFRKALPLARR-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DPW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -25954 for 544 contacts (-47.7/contact) +
2D Compatibility (PS) -9728 + (NN) 7598 + (LL) 32388
1D Compatibility (HY) -2000 + (ID) 1350
Total energy: 954.0 ( 1.75 by residue)
QMean score : 0.001
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