Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTTLAIVRLDPGLPLPSRAHDGDAGVDLYSAEDVELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRVGLSIVNSPGTIDAGYRGEIKVALINLDPAAPIVVHRGDRIAQLLVQRVELVELVEVSSFDEAGLASTSRGDGGHGSSGGHASL
1SLH Chain:A ((22-156))
-STTLAIVRLDPGLPLPSRAHDGDAGVDLYSAEDVELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRVGLSIVNSPGTIDAGYRGEIKVALINLDPAAPIVVHRGDRIAQLLVQRVELVELVEVSSFDEAGLA------------------
General information:
TITO was launched using:
RESULT:
Template:
1SLH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90472 for 904 contacts (-100.1/contact) +
2D Compatibility (PS) -14668 + (NN) -4762 + (LL) -480
1D Compatibility (HY) -19200 + (ID) 6750
Total energy: -136332.0 ( -150.81 by residue)
QMean score : 0.529
(partial model without unconserved sides chains):
PDB file :
Tito_1SLH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SLH-query.scw
PDB file :
Tito_Scwrl_1SLH.pdb
: