Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSASRTMVSSGSEFESAVGYSRAVRIGPLVVVAGT------TGSGDD--IAAQTRDALRRIEIALGQAGATLADVVRTRIYVTDISRWREVGEVHAQAFGKIRPVTSMVEVTALIAPGLLVEIEADAYVGSAVADRNSGAGPKDPSPAGG
1XRG Chain:A ((48-154))
-------------------YSQAIVTGSFVYTSGQIPINPQTGEVVDGGIEEQAKQVLENLKNVLEAAGSSLNKVVKTTVFIKDMDSFAKVNEVYAKYFSEPYPARSCVEVSKL-PKGVLIEIEAVA-----------------------
General information:
TITO was launched using:
RESULT:
Template:
1XRG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54002 for 689 contacts (-78.4/contact) +
2D Compatibility (PS) -11250 + (NN) -5535 + (LL) 892
1D Compatibility (HY) -9200 + (ID) 1900
Total energy: -80995.0 ( -117.55 by residue)
QMean score : 0.514
(partial model without unconserved sides chains):
PDB file :
Tito_1XRG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XRG-query.scw
PDB file :
Tito_Scwrl_1XRG.pdb
: