Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIFAKGHGTQNDFVLLPDVDA-ELVLTAARVAALCDRRKGLGADGVLRVTTAGAAQAVGVLDSLPEGVRVTDWYMDYRNADGSAAQMCGNGVRVFAHYL-RASGLEVRDEFVVGSLAGPRPVTCHHVEAAYADVSVDMG----------------KANRLGAGEAVVGGRRFHGLAVDVGNPHLACVDSQ----LTVDGLAALDVGAPVSFDGAQFPDGVNVEVLTAPVDGAVWMRVHERGVGETRSCGTGTVAAAVAALAAVGSPTGTLTVHVPGG--EVVVTVTDATSFLRGPSVLVARGDLADDWWNAMG |
| 3EKM Chain:A ((29-307)) | --FVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIF--------------AMP-GVNGTDYAMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGKHSFTIHTGAG---LIVPEIQDD-GQVKVDMGTPILKAQDVPTKLSGNKGEAVVEAELVVDGVSWNVTCVSMGNPHCITFGKKGGPNLKVDDLNLPEIG-PKFEHHEMFPARTNTEFVEVLSRSHLKMRVWERGAGATLACGTGACALVVAAVLE-GRADRKCTVDLPGGPLEIEWKQEDNHIYMTGPAEAVFYG----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EKM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149455 for 2261 contacts (-66.1/contact) +
2D Compatibility (PS) -27506 + (NN) -7747 + (LL) 2400
1D Compatibility (HY) -15600 + (ID) 4900
Total energy: -202808.0 ( -89.70 by residue)
QMean score : 0.311
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