Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIDRPLEGKVAFITGAARGLGRAHAVRLAADGANIIAVDICEQIASVPYPLSTADDLAATVELVEDAGGGIVARQGDVRDRASLSVALQAGLDEFGRLDIVVANAGIA----MMQAGDDGWRDVIDVNLTGVFHTVQVAIPTLIEQGTGGSIVLISSAAGLVGIGSSDPGSLGYAAAKHGVVGLMRAYANHLAPQNIRVNSVHPCGVDTPM-INNEFFQQWL------TTADMDAPHNLGNALPVELVQPTDIANAVAWLASEEARYVTGVTLPVDAGFVNKR |
| 3OEC Chain:A ((44-312)) | -----LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGA----PGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGG----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3OEC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -183402 for 2237 contacts (-82.0/contact) +
2D Compatibility (PS) -27106 + (NN) -6002 + (LL) 400
1D Compatibility (HY) -23200 + (ID) 6400
Total energy: -245710.0 ( -109.84 by residue)
QMean score : 0.518
|
|
|