Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRARPLTLLTALAAVTLVVVAGCEARVEAEAYSAADRISSRPQARPQPQPVELLLRAITPPRAPAAS--PNVGFGELPTRVRQATDEAAAMGATLSVAVLDRATGQLVSNGNTQIIATASVAKLFIADDLLLAEAEGKVTL-----------SPE-----------DHHALDV---MLQSSDDGAAERFWSQDGGNAVVTQVARRYGLRSTA---PPSDGRWWNTISSAPDLIRYYDMLLDGSGGLPLDRAAVIIADLAQSTPTGIDGYPQRFGIPDGL-YAEPVAVKQGWM-CCIGSSWM-HLSTGVIGPERRYIMVIESLQPADDATARATITQAVRTMFPNGRI |
| 2JBF Chain:A ((11-268)) | -------------------------------------------------------------------LPPERPLTNLQQQIQQLVSRQPNLTAGLYFFNLD--SGASLNVGGDQVFPAASTIKFPILVAFFKAVDEGRVTLQERLTMRPDLIAPEAGTLQYQKPNSQYAALEVAELMITISDNTATNMIIDRLGGAAELNQQFQEWGLENTVINNPEPDMKGTNT-TSPRDLATL--MLKIGQGEILSPRSRDRLLDIMRRTVTNT-------LLPAGLGKGATIAHKTGDIGIVVGDAGMVDMPNG-----QRYVAAMMVKRPYNDPRGSELIRQVSRMVY----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2JBF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -91953 for 1907 contacts (-48.2/contact) +
2D Compatibility (PS) -25037 + (NN) -11915 + (LL) 6408
1D Compatibility (HY) -9200 + (ID) 3350
Total energy: -135047.0 ( -70.82 by residue)
QMean score : 0.454
|
|
|