Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIDIVTIFPACL-DPLRQSLPGKAIESGLVDLNVHDLRRWTHDVHHSVDDAPYGGGPGMVMKAPVWGEALDEICS--SETLLIVPTPAGVLFTQATAQRWTTESHLVFACGRYEGIDQRVVQDAARRMRVEEVSIGDYVLPGGESAAVVMVEAVLRLLAGVLGNPASHQDDSHSTGLDGLLEGPSYTRPASWRGLDVPEVLLSGDHARIAAWRREVSLQRTRERRPDLSHPD
4IG6 Chain:A ((22-242))
MIFNVLTIFPQMFPGPLGVSNLGSALKKGLWTLNVFDIRAFANNKHNTVDDTPYGGGPGMLLRADVLGRCIDEVLSLHPNTKLMFTSPRGVSFTQDIARQTMNFDNITLLCGRFEGIDERVVD----FYKLQEVSIGDYVLSGGELAAMVIIDTCVRMVPGVIGNAESLKQES----MEGSLEYPQYTRPASWKGMEVPEVLLTGNHGEIEKWRRNASLSITAARRPDL----
General information:
TITO was launched using:
RESULT:
Template:
4IG6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -140089 for 1548 contacts (-90.5/contact) +
2D Compatibility (PS) -23397 + (NN) -5975 + (LL) 8
1D Compatibility (HY) -24000 + (ID) 5400
Total energy: -198853.0 ( -128.46 by residue)
QMean score : 0.439
(partial model without unconserved sides chains):
PDB file :
Tito_4IG6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IG6-query.scw
PDB file :
Tito_Scwrl_4IG6.pdb
: