Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSAPDVRLTAWVHGWVQGVGFRWWTRCRALELGLTGYAANHADGRVLVVAQGPRAACQKLLQLLQGDTTPGRVAKVVADWSQSTEQITGFSER
4OJH Chain:A ((15-99))
------RMYARVYGLVQGVGFRKFVQIHAIRLGIKGYAKNLPDGSVEVVAEGYEEALSKLLERIKQGPPAAEVEKVDESFSEYKGEFEDFE--
General information:
TITO was launched using:
RESULT:
Template:
4OJH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57298 for 632 contacts (-90.7/contact) +
2D Compatibility (PS) -9575 + (NN) -6085 + (LL) 504
1D Compatibility (HY) -7600 + (ID) 1700
Total energy: -81754.0 ( -129.36 by residue)
QMean score : 0.644
(partial model without unconserved sides chains):
PDB file :
Tito_4OJH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OJH-query.scw
PDB file :
Tito_Scwrl_4OJH.pdb
: