Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRSRQPLLDALGVDLP-DELLSLALTHRSYAYENGG-----LPTNERLEFLGDAVLGLTITDALFHRHPDRSEGDLAKLRASVVNTQALADVARRLCAEGLGVHVLLGRGEANTGGADKSSILADGMESLLGAIYLQHGMEKAREVILRLFGPLLDAAPTLGAGLDWKTSLQELTAARGLGAPSY-LVTSTGPDHDKEFTAVVVVMDSEYGSGVGRSKKEAEQKAAAAAWKALEVLDNAMPGKTSA
1O0W Chain:A ((17-235))
------------GINFKNEELLFRALCHSSYANEQNQAGRKDVESNEKLEFLGDAVLELFVCEILYKKYPEAEVGDLARVKSAAASEEVLAMVSRKM---NLGKFLFLGKGEEKTGGRDRDSILADAFEALLAAIYLDQGYEKIKELFEQEFEFYIEKIMKGEMLFDYKTALQEIVQSEHKVPPEYILVRTEKNDGDRIFVVEVRVNGKTIATGKGRTKKEAEKEAARIAYEKL-------------
General information:
TITO was launched using:
RESULT:
Template:
1O0W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65177 for 1634 contacts (-39.9/contact) +
2D Compatibility (PS) -23628 + (NN) -10972 + (LL) 2052
1D Compatibility (HY) -15600 + (ID) 4350
Total energy: -117675.0 ( -72.02 by residue)
QMean score : 0.441
(partial model without unconserved sides chains):
PDB file :
Tito_1O0W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O0W-query.scw
PDB file :
Tito_Scwrl_1O0W.pdb
: