Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRIIGGVAGGRRIAVPPRGTRPTTDRVRESLFN-----IVTARRDLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERATTCAPLTWPEGWRRWPQRVYGDTRLELAERLFANV
2FPO Chain:A ((13-191))
QIRIIGGQWRGRKLPVPDS-----TDRVRETLFNWLAPVIVDAQ-------CLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGT-PHNIVFVDPPFR--RGLLEETINLLEDNGWLADEALIYVESEVENGLPTVPANWSLHREKVAGQVAYRLYQR-----
General information:
TITO was launched using:
RESULT:
Template:
2FPO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103349 for 1350 contacts (-76.6/contact) +
2D Compatibility (PS) -18537 + (NN) -9283 + (LL) 944
1D Compatibility (HY) -10800 + (ID) 3150
Total energy: -144175.0 ( -106.80 by residue)
QMean score : 0.565
(partial model without unconserved sides chains):
PDB file :
Tito_2FPO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FPO-query.scw
PDB file :
Tito_Scwrl_2FPO.pdb
: