Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVAAAAKVNTLLDIAQANLGEAAGTYVAADAAAASSYTGF
3Q4H Chain:A ((5-94))
----DAHIPQLIASEANFGAKAALMRSTIAQAEQAAMSSQAFHMGEASAAFQAAHARFVEVSAKVNALLDIAQLNIGDAASSYVAQDAAAASTY---
General information:
TITO was launched using:
RESULT:
Template:
3Q4H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2054 for 466 contacts (-4.4/contact) +
2D Compatibility (PS) -9293 + (NN) -2237 + (LL) 568
1D Compatibility (HY) 400 + (ID) 1050
Total energy: -13666.0 ( -29.33 by residue)
QMean score : 0.158
(partial model without unconserved sides chains):
PDB file :
Tito_3Q4H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q4H-query.scw
PDB file :
Tito_Scwrl_3Q4H.pdb
: